Gene LmjF24.2010 (L.major)
LmjF24.2010
Species: L.major
Alias: LmjF24.2010, LmajK168
External Links:
Annotation:
Sequence
Name | Sequence Type | Origin | Length | Description | Download |
---|---|---|---|---|---|
LmjF24.2010.AA | Protein | None | 1089 | None | Fasta, JSON |
LmjF24.2010.kin_dom | Protein Kinase Domain | None | 252 | None | Fasta, JSON |
Protein domains of LmjF24.2010.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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PI3Ka | LmjF24.2010.AA | PI3Ka | 336-561 | 22 | 1.2e-13 | 52.53 | SMART | 1-232 (232) | Show / Hide |
Range on Protein: 336-561 Range on HMM: 1-232/232 Sequence Identity: 22% (61 aa) DSSAPP--GPKERHQLASLLRRPPIQLDNVTGAVVTGAGAGGVGGVRLEETRLLWKYRHFICRDGKYFLP------FMRCVDWANTHSSERRAACALIHQ | | ..|| || ....|| . || .|.||.||..... . || |.|||.| ....| | .|.|| DYDLKPRWNEEERDQLEDIMKYPPTY------------------ELTEEEKDLIWKFRHYYLTNHPKALPSMCFPKFLRCVNW--SWADEVKQAYQLMHQ W--ARPAFEDVLACLSFYFDH--VAPVRQYAVRLLRREGDGRLCQLAFQLVQAVRYD---------------------------SAEAELANFLVERAVG | . || | |...| . . ||||||. |.. | | . |||||..|. ... .|. ||..||. WWWPPIDPEDALELLDPKFPDYNCPHVRQYAVQCLEQMSDDELLHYLLQLVQALKYENFDHIKHHFCEFDQDQSMSMTKEEDGPYHDSPLCRFLLQRALC CWELCSTLHTLLSVEV----ALEKCRTSSAAGKASDDRHGGTTLFKPLLRRLSERLTQQC-PHFVKRLRQ . . .. .| .|. .|. . .. . .| |.. ..| | ...|.. NPRIGHFFYWYLKSEMYDHCQLHDPHY------------------CQRFGMLLEMYCRGCCGHHMRHLFK |
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PI3Ka | LmjF24.2010.AA | PI3Ka | 381-494 | 31 | 1.5e-12 | 44.72 | Pfam | 28-156 (211) | Show / Hide |
Range on Protein: 381-494 Range on HMM: 28-156/211 Sequence Identity: 31% (41 aa) LEETRLLWKYRHFICRDGKYFLP-------FMR-CVDWANTHSSERRAACALIHQ--WARPAFEDVLACLSFYFDH-VAPVRQYAVRLLRR-EGDGRLCQ .|| |.||.||..| . || |.. || | ...... | .| |. .| | |.. | . ||||||. |.. | | . AEEKCLIWKFRHYCCMNNPKALPLMCVGPKFLQLCVKW--HDYDQVAQAYQLMDCRVWPPIDPCDALELLDCNFPDNCPMVRQYAVKCLESYMSDDELLC LAFQLVQAVRYD-----SAEAELANFLVERA |||||..|. . |. ||..|| YLLQLVQALKYENFDEPFHDSYLSRFLLWRA |
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Kinase | LmjF24.2010.AA | PI3Kc | 836-1086 | 26 | 6.9e-87 | 295.88 | SMART | 1-336 (336) | Show / Hide |
Range on Protein: 836-1086 Range on HMM: 1-336/336 Sequence Identity: 26% (89 aa) AMMYKYNDDIRQDQLIVQLIRLMNDLLQQD----GMQLYLTPYRVIATGPNEGLVEIVPQVTTFFSVQR------------------------------- |...| .|| |||... |..||||...|.| .. |...||..|.|||. |..| || ..|. ..|. AVIFKCGDDLRQDMRMMQMFRLMNKIWQKDKECRRRDLHMRPYKCIPTGPKCGMIEWVPNCETLHQIQKKYHKWKKMPMDYHQWFMFDMLVPEIQKNMYM ------------------------------------DVLKYLRVYNNTA-ELLRQAMDRYTRSFAGYCVITFVLGIGDRHLENILIT-QDGRLLHIDFGY . ..... .. .. | ..|.|..||| ||||..|..|||||||..||... ..| ..|||||. MIWHQQACHWMMMYQHMTHMEWLKYFEGATCPFKPPVLYDWFWEHFPDPNEDWWEARDNFTRSCAGYCMVTYILGIGDRHNDNIMLDMKTGHCFHIDFGH VLGNDPKPFPP--------PMKINREMVEVLG--GPQSTGFTEFKLYCCSAYNTLRKHAPLLLHILLLGAHTEGMPQVTGEGGDPRVNLLKVQEKLRLD- .|..||.... |.. ..||.| | | .| | .|. .||.||. .|||. |..... . .... ||. ... . ......||| IFGHGPKKPGFKHHHRERVPFRLTHDMVYVMGGGGKPSGYFGYFRTCCCRAYRAMRKHSNLIMNLFEMMVYDPIMPCWRMM----EKDIKYLRQRFRLDH LTNAQATQYLQN-----VIADSVGSIFTNLWDVLHAAAQA |. .|.|| .. .| .|..| .| . ...| ||. LSDEEAAQYFMQTMCTKLIEHSNESWTTRMYWMFHNWAQY |
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PI3_PI4_kinase | LmjF24.2010.AA | PI3_PI4_kinase | 834-1032 | 25 | 7.5e-66 | 229.88 | Pfam | 1-300 (300) | Show / Hide |
Range on Protein: 834-1032 Range on HMM: 1-300/300 Sequence Identity: 25% (76 aa) PLAMMYKYNDDIR--QDQLIVQLI-----------------------RLMNDLLQQDGMQLY----LTPYRVIATGPNEGLVEIVPQVTTFFSVQRDV-- ... |..|| | ||....|.| ||||.....||. . ..|||.|.|||. |..| ||..||| ..| WYPFIFKGGDDLRCRQDMRMMQMICVFKPKDEEPYANNPNKWTMWQHRLMNKCWKKDGCDRRRNMQMQPYRCIPTGPWCGMIEWVPNCTTFHEIPRTYMV ---------------------------------------------LKYLRVYNNTA-ELLRQAMDRYTRSFAGYCVITFVLGIGDRHLENILI---TQDG ..... .| .| | . .|.|...||.||.||....||.||||..||.. . .| KCKHKHFNKEHKMWMKMWPDWWHLMRMQKVEVFEMRIMKTPKPGLYQWFWKHNPDAYEEWWEARDNFVRSCAGMCVVDYILGNGDRHNDNIMVKDDKTTG RLLHIDFGYVLG-----NDPKPFPPPMKINR------EMVEVLGG----PQSTGFTEFKLYCCSAYNTLRKHAPLLLHIL-------LLGAHTEGMPQVT | |||||. .. ..||...|.. . .||...|| ..|. . .|. ||..||. ||.|. |... | .. .|. |.| . HLFHIDFGHCFPHWKMKHFHKPERVPFRWTHWPQAKKPMVHAMGGYISLDPSGDYGWFRDYCWHAYRALRRHMNLCMNLLKKAVMRGECMVHD-GLPMWR G S |
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Kinase | LmjF24.2010.AA | PIKK | 922-965 | 48 | 2.9e-12 | 41.3 | In-house | 188-232 (290) | Show / Hide |
Range on Protein: 922-965 Range on HMM: 188-232/290 Sequence Identity: 48% (22 aa) RYTRSFAGYCVITFVLGIGDRHLENILITQD-GRLLHIDFGYVLG .|||| | |. ..||.||||.|||.| .. | ..|||||. . NYTRSYAVMCMVGYILGLGDRHPENIMIDMQTGEIVHIDFGCCFE |
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Kinase | LmjF24.2010.AA | ATR | 919-1021 | 25 | 1.3e-10 | 31.91 | In-house | 163-267 (267) | Show / Hide |
Range on Protein: 919-1021 Range on HMM: 163-267/267 Sequence Identity: 25% (27 aa) AMDRYTRSFAGYCVITFVLGIGDRHLENILITQ-DGRLLHIDFGYVLGN---DPKPFPPPMKINREMVEVLGGPQSTGFTEFKLYCCSAYNTLRKHAPLL . . | ||.| .|.. ...|.|||| .|||| . | . |.|. . . | | .. . || .| .. | |. | .|.| . SRENYCRSYAVWCMVGYIIGLGDRHTDNILIDKINGECVHVDYNCIFNSGEQFEVPEIVPFRLTHNMVFGMGPMKTYGL--FRRACEVIMMCMRDHRDDI LHILLLG . .. MSVWDCF |
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Kinase | LmjF24.2010.AA | ATM | 923-961 | 52 | 2.3e-10 | 28.94 | In-house | 140-179 (304) | Show / Hide |
Range on Protein: 923-961 Range on HMM: 140-179/304 Sequence Identity: 52% (21 aa) YTRSFAGYCVITFVLGIGDRHLENILIT-QDGRLLHIDFG |||| | .. ..||.|||| |||| | | ||| | YTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLG |
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Kinase | LmjF24.2010.AA | FRAP | 923-961 | 47 | 7.6e-10 | 32.5 | In-house | 140-179 (251) | Show / Hide |
Range on Protein: 923-961 Range on HMM: 140-179/251 Sequence Identity: 47% (19 aa) YTRSFAGYCVITFVLGIGDRHLENILIT-QDGRLLHIDFG |||| | .. ..||.||||. ||.. . |...||||| YTRSLATMSMAGYILGLGDRHPSNIMLQRYTGKIVHIDFG |
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Kinase | LmjF24.2010.AA | DNAPK | 921-965 | 39 | 1.2e-08 | 27.41 | In-house | 188-233 (301) | Show / Hide |
Range on Protein: 921-965 Range on HMM: 188-233/301 Sequence Identity: 39% (18 aa) DRYTRSFAGYCVITFVLGIGDRHLENILIT-QDGRLLHIDFGYVLG ... |..| |. ..||||||||.| .. | ||||. | EHFIRNYAVICISHWILGIGDRHLNNFMVNMENGDIISIDFGHSFG |
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Kinase | LmjF24.2010.AA | PIKK | 837-887 | 38 | 1.4e-08 | 27.77 | In-house | 33-87 (290) | Show / Hide |
Range on Protein: 837-887 Range on HMM: 33-87/290 Sequence Identity: 38% (21 aa) MMYKYNDDIRQDQLIVQLIRLMNDLLQQD----GMQLYLTPYRVIATGPNEGLVE ...| .|.|||| . ||..||| .||.| | .. |.||. ... ||.| YLCKGHEDLRQDQRVMQLFQLMNTCLQKDPECQKRHLHIRTYSVIPMSQRCGLIE |
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Kinase | LmjF24.2010.AA | SMG1 | 923-960 | 43 | 9e-06 | 14.9 | In-house | 190-228 (242) | Show / Hide |
Range on Protein: 923-960 Range on HMM: 190-228/242 Sequence Identity: 43% (17 aa) YTRSFAGYCVITFVLGIGDRHLENILI-TQDGRLLHIDF | || | .. ...|.|||||.|.|| | |||. YARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDY |
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Kinase | LmjF24.2010.AA | FRAP | 835-865 | 38 | 0.007207 | 6.55 | In-house | 2-32 (251) | Show / Hide |
Range on Protein: 835-865 Range on HMM: 2-32/251 Sequence Identity: 38% (12 aa) LAMMYKYNDDIRQDQLIVQLIRLMNDLLQQD . | .||||| . || |.| ||. . YHFLLKGHEDIRQDERVMQLFGLINRLLHNN |
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Kinase | LmjF24.2010.AA | ATM | 837-863 | 40 | 0.050329 | 1.8 | In-house | 2-28 (304) | Show / Hide |
Range on Protein: 837-863 Range on HMM: 2-28/304 Sequence Identity: 40% (11 aa) MMYKYNDDIRQDQLIVQLIRLMNDLLQ . | ||.||| . | . | ||| QLVKGRDDLRQDAVMQQVFQMCNTLLQ |
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Kinase | LmjF24.2010.AA | DNAPK | 838-865 | 46 | 0.136331 | 1.34 | In-house | 36-63 (301) | Show / Hide |
Range on Protein: 838-865 Range on HMM: 36-63/301 Sequence Identity: 46% (13 aa) MYKYNDDIRQDQLIVQLIRLMNDLLQQD .|| | |||| | || || . .| CYKGIEDLRQDQRIEQLFQVMNNIFEYD |